Anne M. Stringer

Footprint-seq quantitatively maps protein-DNA interactions in vitro with high resolution and sensitivity, demonstrating its effectiveness for bacterial systems.

This study shows that HppXCROD2, an H-NS homologue from plasmid pCROD2, selectively binds its own plasmid rather than the host chromosome or other plasmids.

This study identifies key residues in RhlR that determine ligand specificity and shows how ligand-driven gene regulation affects phenazine gene expression in Pseudomonas aeruginosa.

The paper quantifies the effectiveness of all possible trinucleotide sequences as PAMs for the V. cholerae type I-E CRISPR-Cas system, identifying 15 functional PAMs out of 64.

This study identifies DicC, a cryptic prophage transcription factor in E. coli, and shows it regulates hundreds of host genes, influencing bacterial phenotypes independently of other prophage genes.