Author

Yi Shi

Fudan UniversityORCID 0000-0003-4202-3297Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Yi Shi6 papers · Icahn School of Medicine at Mount Sinai

Biology Disciplines

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Synthetic Biology· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:DNA methylation· 1 Organism:E. coli· 1 Research Focus:gene regulatory network inference· 1 Assay:whole-genome sequencing· 1 Organism:yeast· 1

Frequent Co-Authors

Hao CheniD· 1 shared Hong LüiD· 1 shared Hongcheng Chen· 1 shared Jungang ZhouiD· 1 shared Kexin Huang· 1 shared Kexin Zhen· 1 shared Kunfeng Song· 1 shared Lin CheniD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperSynthetic Biology

Hao ChenORCID

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2 papers

Recent·Most cited

Synthetic BiologyNature CommunicationsPeer-reviewedJan 8, 2026

Intergeneric chromosomal transfer in yeast results in improved phenotypes and widespread transcriptional responses

Yilin Lyu, Yi Shi, Kunfeng Song…·Hong Lü

This study transfers chromosomes from Saccharomyces cerevisiae to Kluyveromyces marxianus, resulting in improved phenotypes and widespread transcriptional changes.

4 citations

yeastDNA methylation

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Synthetic BiologybioRxivPreprintApr 13, 2025

Modular Engineering of Escherichia coli for Enhanced Nickel Uptake, Survival, Biomineralization, and Hydrogen-Supported Bioremediation

Yi Shi, Ruiwen Ma, Qi Lin…·Kexin Zhen

This paper engineers Escherichia coli with four modules to enhance nickel uptake, survival, biomineralization, and hydrogen-based bioremediation.

1 citation

E. coliexperimental assay

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