Mike Marquet

This study shows that Candida albicans and Enterococcus faecalis synergistically increase host cell damage through physical interaction and glucose depletion.

The paper introduces CLEAN, a pipeline to remove contaminants from sequencing data, improving reproducibility and analysis quality.

This study evaluates Oxford Nanopore sequencing for outbreak tracing, identifies methylation-induced errors, and proposes a masking workflow to improve accuracy.

This study evaluates Oxford Nanopore's adaptive sequencing for improving microbial sequencing yield in human vaginal samples by selectively depleting host DNA.

What the Phage provides a scalable, parallel workflow for phage sequence identification and analysis using multiple prediction tools and downstream annotation.