BioinformaticsJournal of Proteome ResearchPeer-reviewed
nf-encyclopedia: A cloud-ready pipeline for chromatogram library data-independent acquisition proteomics workflows
Carolyn I. Allen, Rico Meinl, Sebastian Juan Paez…·William E. Fondrie
The paper introduces nf-encyclopedia, a NextFlow pipeline for DIA proteomics analysis, showing it works well on cloud and local platforms and improves protein quantification with MSstats.
6 citations