Author

Manoocher Soleimani

University of New MexicoORCID 0000-0003-4909-4469Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:long-read sequencing· 1 Organism:mouse· 1

Frequent Co-Authors

Kamyar A. ZahediiD· 2 shared Sharon BaroneiD· 2 shared Alexandra SchnelliD· 1 shared Allon WagneriD· 1 shared Aviv RegeviD· 1 shared Brandon Schellhaass· 1 shared Chao WangiD· 1 shared Christos ArgyropoulosiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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2 shared papersMolecular Biology

Kamyar A. ZahediORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Molecular BiologybioRxivPreprintSep 23, 2026

The Activation of the Transcription Factor NRF2 in Epithelial Cells Lining the Kidney Cysts in Tuberous Sclerosis Complex (TSC): The Interplay of Fumarate Hydratase 1, KEAP1, and NRF2 in Kidney Cystogenesis

Sharon Barone, Kamyar A. Zahedi, Manoocher Soleimani

This paper investigates the role of NRF2 activation in TSC kidney cysts, showing its involvement in metabolic reprogramming and cyst expansion through glutaminolysis.

DOI 10.64898/2026.09.22.753536

mousebulk RNA-seq

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Molecular BiologybioRxivPreprintDec 16, 2022

To make a short story long: simultaneous short and long RNA profiling on Nanopore devices

Morgan E. Mackenzie, Susan L. Tigert, Debbie M. Lovato…·Christos Argyropoulos

This paper introduces a method to simultaneously profile short and long RNA reads on Nanopore sequencing, demonstrating linear detection across a wide range of RNA abundance and length in synthetic and biological samples.

2 citations

long-read sequencingexperimental assay

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GenomicsCellPeer-reviewedJul 2, 2021

In Silico Modeling of Metabolic State in Single Th17 Cells Reveals Novel Regulators of Inflammation and Autoimmunity

Allon Wagner, Chao Wang, Johannes Fessler…·Nir Yosef

The paper introduces Compass, an algorithm that uses single-cell RNA-Seq and flux balance analysis to characterize metabolic states in Th17 cells, revealing a metabolic switch and novel anti-inflammatory regulators.

524 citationstop 1%

humanscRNA-seq

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