Author

Samina Alam

Pennsylvania State UniversityORCID 0009-0000-1174-3430Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Craig MeyersiD· 2 shared Sreejata ChatterjeeiD· 2 shared Anna C. SalzbergiD· 1 shared Cesar A. AliagaiD· 1 shared Christopher C. TsengiD· 1 shared David GoldenbergiD· 1 shared David Y. GoldrichiD· 1 shared Emily MilarachiiD· 1 shared

Activity by Year

2018-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersCancer Biology

Craig MeyersORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Cancer BiologyMolecular Cancer ResearchPeer-reviewedOct 30, 2024

Genome Instability Precedes Viral Integration in Human Papilloma Virus Transformed Tonsillar Keratinocytes

Kimberly Chan, Christopher C. Tseng, Emily Milarachi…·James Riley Broach

This study shows that genomic instability occurs before viral integration in HPV-transformed cells and that episomal virus leads to less tumorigenicity than integrated virus.

4 citations

humanwhole-genome sequencing

𝕏 PostBluesky

GenomicsJournal of VirologyPeer-reviewedJul 26, 2018

The Effect of Productive HPV16 Infection on Global Gene Expression of Cervical Epithelium

Sa Do Kang, Sreejata Chatterjee, Samina Alam…·Craig Meyers

This study identifies global gene expression changes in early-stage HPV16 infection in cervical tissue, revealing distinct transcriptomes compared to cancerous stages and potential therapeutic targets.

37 citations

humanbulk RNA-seq

𝕏 PostBluesky