Wenyu Fang

FishMamba-1 is a linear-complexity foundation model designed for polyploid Cyprinid genomes, achieving high precision in gene annotation without RNA-seq evidence.

This study investigates the genomic and genetic factors underlying speciation and pigment pattern diversification in Danio fishes, revealing introgression, functional divergence of specific genes, and evolutionary changes in protein and regulatory sequences.

GageTracker dates gene age using micro- and macro-synteny with high speed and accuracy, outperforming existing tools in alignment quality and speed.

This paper presents a chromosome-level genome assembly of Acanthopagrus latus using PacBio and Hi-C technologies, enabling research on sex reversal mechanisms.