Author

Eljas Roellin

Helmholtz MunichORCID 0009-0002-4181-5516Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 3 Approach:machine learning (classical)· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:dimensionality reduction· 1

Frequent Co-Authors

Fabian Joachim TheisiD· 2 shared Alejandro Tejada-LapuertaiD· 1 shared Altana NamsaraevaiD· 1 shared Amir Ali MoinfariD· 1 shared Antonia SchumacheriD· 1 shared Chris SanderiD· 1 shared Christian ConradiD· 1 shared Daniel C. StrobliD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersBioinformatics

Fabian Joachim TheisORCID

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3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJun 25, 2026

The Human Pancreas Cell Atlas defines a healthy reference framework for disease contextualization and translational benchmarking

Shrey Parikh, Daniel C. Strobl, Sara Jiménez…·Fabian Joachim Theis

The paper constructs a healthy human pancreas reference atlas to contextualize disease states and benchmark models.

DOI 10.64898/2026.06.22.733853

𝕏 PostBluesky

BioinformaticsNature MethodsPeer-reviewedDec 31, 2025

Pertpy: an end-to-end framework for perturbation analysis

Lukas Heumos, Yuge Ji, L T May…·Fabian Joachim Theis

Pertpy provides a modular framework for analyzing large-scale perturbation single-cell experiments, offering tools for metadata annotation and perturbation distance calculations.

74 citationstop 1%

scRNA-seqmachine learning (classical)

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BioinformaticsBioinformaticsPeer-reviewedDec 23, 2022

SIMBSIG: Similarity search and clustering for biobank-scale data

Michael F. Adamer, Eljas Roellin, Lucie Bourguignon, Karsten Michael Borgwardt

SIMBSIG enables scalable similarity search and clustering for large biobank datasets using a GPU-enabled Python package.

DOI 10.1093/bioinformatics/btac829

bulk RNA-seqstatistical model

𝕏 PostBluesky