Yangmei Qin

MAAS integrates multimodal scATAC-seq data to identify clinically relevant tumor subpopulations and improve prognostic prediction.

The paper presents evidence that eukaryotic circular RNAs can be translated in the 3' to 5' direction, producing novel proteins with distinct features, and identifies millions of potential BT proteins across species.

This study identifies eRNA-QTLs and susceptibility eRNAs across 23 cancer types, revealing new cancer susceptibility genes through eRNA-based transcriptome-wide association.

xQTLbiolinks is a tool for integrative analysis of molecular QTLs, enabling retrieval, preprocessing, and colocalization with GWAS data to identify disease-risk genes.

This paper develops a genome-free method to improve transcriptome assembly using integrated NGS and TGS data in amphioxus, expanding gene annotations and creating a new database.

The paper introduces a reference-free method, Cirit, for de novo detection of circRNAs from NGS transcriptomes, identifying 28,813 human circRNAs and highlighting their diverse expression patterns and splicing mechanisms.