Author

Carli D. Needle

National Institutes of HealthORCID 0009-0002-9768-3831Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Developmental Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1 Organism:zebrafish· 1

Frequent Co-Authors

ABDEL G. ELKAHLOUNiD· 1 shared Abigail GaylordiD· 1 shared Abonti N. Ahmed· 1 shared Ajay B. ChitnisiD· 1 shared Alejandro PirontiiD· 1 shared Alice M. TillmaniD· 1 shared Anusha SrivastavaiD· 1 shared Bo ShopsiniD· 1 shared

Activity by Year

2020-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperDevelopmental Biology

ABDEL G. ELKAHLOUNORCID

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2 papers

Recent·Most cited

MicrobiologybioRxivPreprintApr 17, 2025

Gastrointestinal colonization as a source of Staphylococcus aureus in atopic dermatitis

Theodora K. Karagounis, Gregory Putzel, Magdalena M Podkowik…·Bo Shopsin

This study identifies the gut as a major reservoir of Staphylococcus aureus that can be transmitted to the skin and worsen atopic dermatitis.

DOI 10.1101/2025.04.17.648849

humanbulk RNA-seq

𝕏 PostBluesky

Developmental BiologybioRxivPreprintMar 3, 2020

A metabolic shift to glycolysis promotes zebrafish tail regeneration through TGF-β dependent dedifferentiation of notochord cells to form the blastema

Jason W. Sinclair, David R. Hoying, Erica Bresciani…·Shawn Michael Burgess

6 citations

zebrafishscRNA-seq

𝕏 PostBluesky