Author

Ravi Boya

University of PennsylvaniaORCID 0009-0003-5477-7085Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:human· 2 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Assay:Hi-C· 1 Assay:long-read sequencing· 1 Assay:scRNA-seq· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Han-Seul RyuiD· 2 shared Jennifer E. Phillips‐CreminsiD· 2 shared Keerthivasan Raanin ChandradossiD· 2 shared Abraham J. WaldmaniD· 1 shared Alexandria NikishiD· 1 shared Constin LiuiD· 1 shared Katelyn R. TitusiD· 1 shared Kenneth PhamiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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2 shared papersNeuroscience

Han-Seul RyuORCID

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2 papers

Recent·Most cited

NeurosciencebioRxivPreprintSep 30, 2025

Persistent chromatin loops shape gene expression plasticity upon stimulation and restimulation of human neurons

Abraham J. Waldman, Kenneth Pham, Katelyn R. Titus…·Jennifer E. Phillips‐Cremins

The paper shows that persistent chromatin loops in human neurons influence gene expression plasticity during and after stimulation, with some loops maintaining repression or activation for up to five days.

DOI 10.1101/2025.09.30.679661

humanscRNA-seq

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GenomicsbioRxivPreprintApr 29, 2024

MASTR-seq: Multiplexed Analysis of Short Tandem Repeats with sequencing

Su Chuanbin, Keerthivasan Raanin Chandradoss, Thomas Malachowski…·Jennifer E. Phillips‐Cremins

MASTR-seq enables cost-effective, high-throughput, and accurate measurement of STR length and DNA methylation at single-allele resolution using nanopore sequencing.

1 citation

humanlong-read sequencing

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