Author

Nadia Houerbi

Weill Cornell MedicineORCID 0009-0004-2931-8984Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Cell Biology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:gene regulatory network inference· 2 Assay:long-read sequencing· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Organism:human· 1

Frequent Co-Authors

Christopher E. MasoniD· 3 shared Theodore M. NelsoniD· 3 shared Caroline J. AufgebaueriD· 2 shared Evan M VioletteiD· 2 shared Jacqueline Proszynski· 2 shared Krista Ryon· 2 shared Michael GoneosiD· 2 shared Stacy M. HorneriD· 2 shared

Activity by Year

2026-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersBioinformatics

Christopher E. MasonORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 16, 2026

Modulator Resolves Transcript-, Allele-, and Condition-associated RNA Modification Differences from Direct RNA Sequencing

Theodore M. Nelson, Michael Goneos, Caroline J. Aufgebauer…·Christopher E. Mason

Modulator processes nanopore direct-RNA sequencing data to differentiate transcript-, allele-, and condition-associated RNA modifications, improving the analysis of RNA modifications in single molecules.

DOI 10.64898/2026.10.15.759385

humanlong-read sequencing

𝕏 PostBluesky

Cell BiologyNature MethodsPeer-reviewedJun 22, 2026

DERIVATION OF ELEPHANT INDUCED PLURIPOTENT STEM CELLS

E. M. Appleton, Nataly Korover, Kyung-Hee Hong…·Eriona Hysolli

This paper reports the first derivation of elephant induced pluripotent stem cells (emiPSCs) using a modified reprogramming protocol that inhibits TP53 expansion genes.

10 citations

experimental assaycell type annotation

𝕏 PostBluesky

Molecular BiologybioRxivPreprintJun 8, 2026

Transcript architecture sets the m6A landscape: CSTF2 and CSTF2T reshape m6A through cleavage-dependent and -independent mechanisms

Caroline J. Aufgebauer, Theodore M. Nelson, Nadia Houerbi…·Stacy M. Horner

The paper identifies CSTF2 and CSTF2T as factors that shape the m6A landscape through cleavage-dependent and -independent mechanisms by altering transcript architecture and polyadenylation sites.

DOI 10.64898/2026.03.27.714597

long-read sequencingstatistical model

𝕏 PostBluesky