Author

Charlotte Reiche

Memorial Sloan Kettering Cancer CenterORCID 0009-0004-6449-8335Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Organism:human· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:clustering· 1 Assay:spatial transcriptomics· 1 Research Focus:trajectory inference· 1

Frequent Co-Authors

Benjamin D. GreenbaumiD· 2 shared Martina MilighettiiD· 2 shared Vinod P. BalachandraniD· 2 shared Yuval ElhanatiiD· 2 shared Agustin Cardenas· 1 shared Aleksandra M. WalczakiD· 1 shared Alice Wei· 1 shared Benoı̂t RousseauiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 40 mutual co-author links

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2 shared papersImmunology

Benjamin D. GreenbaumORCID

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2 papers

Recent·Most cited

Computational identification of responding T cell clones from longitudinal repertoire sequencing

Martina Milighetti, Zachary M. Sethna, Stephen Martis, Charlotte Reiche, Yuval Elhanati, Vinod P. Balachandran, Benjamin D. Greenbaum, Aleksandra M. Walczak, Thierry Mora

This paper introduces CloneSearch, a method to identify expanding and contracting T cell clones from longitudinal TCR sequencing without requiring antigen-specific information.

bioRxiv · Oct 21, 2026 · PreprintImmunology

Neoantigen-reactive CD8+ T cell engagement marks exceptional survivors of pancreatic cancer

Marc Hilmi, Joshua David Schoenfeld, Wilson McKerrow, Yuval Elhanati, Catherine A. O’Connor, Shigeaki Umeda, Nicolas Lecomte, Jerry P. Melchor, Agustin Cardenas, Maria Lao, Vincenzo Nasca, Elias-Ramzey R. Karnoub, Nuray Tezcan, Zeynep Cagla Tarcan, Joanne F. Chou, , Wungki Park

The paper identifies TIE CD8+ T cell clonotypes associated with prolonged survival in pancreatic cancer patients and links resistance to stromal and immune barriers.

bioRxiv · Sep 18, 2026 · PreprintCancer Biology