Author

Catherine A. McCarthy

Wellcome Sanger InstituteORCID 0009-0009-1803-187XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

Geetha SankaranarayananiD· 2 shared Matthew BerrimaniD· 2 shared Nancy E. HolroydiD· 2 shared Adam James ReidiD· 1 shared Adam WeissiD· 1 shared Anna WaweriD· 1 shared Avril CoghlaniD· 1 shared Ben Softley· 1 shared

Activity by Year

2019-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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2 shared papersSystems Biology

Geetha SankaranarayananORCID

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2 papers

Recent·Most cited

Systems BiologyBMC BiologyPeer-reviewedDec 1, 2021

Daily rhythms in the transcriptomes of the human parasite Schistosoma mansoni

Kate A. Rawlinson, Adam James Reid, Zhigang Lu…·Matthew Berriman

This study identifies daily transcriptomic rhythms in Schistosoma mansoni, revealing rhythmic gene expression patterns and their potential relevance to parasite survival and drug targets.

20 citations

humanbulk RNA-seq

𝕏 PostBluesky

GenomicsFrontiers in GeneticsPeer-reviewedSep 20, 2019

Evaluation of DNA extraction methods on individual helminth egg and larval stages for whole genome sequencing

Stephen R. Doyle, Geetha Sankaranarayanan, Fiona Allan…·Nancy E. Holroyd

The paper evaluates DNA extraction methods for whole genome sequencing of individual helminth eggs and larvae, showing successful sequencing for six of eight species tested.

54 citationstop 2%

whole-genome sequencingexperimental assay

𝕏 PostBluesky