Author

Shakila Mahmuda Fatima

University of IowaORCID 0009-0009-1908-069XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Immunology· 1 Neuroscience· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:mouse· 3 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Assay:fluorescence / live-cell microscopy· 1 Assay:imaging· 1

Frequent Co-Authors

Marlan Rex HanseniD· 3 shared Muhammad Taifur RahmaniD· 3 shared Alexander D. ClausseniD· 2 shared Brian J. MostaertiD· 2 shared Bryce HungeriD· 2 shared Ibrahim RazuiD· 2 shared Nashwaan Ali Khan· 2 shared Robert D. GayiD· 2 shared

Activity by Year

2024-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 43 mutual co-author links

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3 shared papersSystems Biology

Marlan Rex HansenORCID

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3 papers

Recent·Most cited

Establishment of a cochlear lymphatic vascular network and immune surveillance system following cochlear implantation

Muhammad Taifur Rahman, Ibrahim Razu, Shakila Mahmuda Fatima, Brian J. Mostaert, Bryce Hunger, Md. F. Hossain, Diana Correa, Jennifer T. O’Malley, Nashwaan Ali Khan, Zhenshen Zhang, Osama Tarabichi, Ya Lang Enke, Robert D. Gay, Jacob Oleson, Noah S. Butler, , Marlan Rex Hansen

This study identifies a lymphatic vascular network and immune surveillance system in the cochlea following implantation, contributing to inflammatory responses.

bioRxiv · Oct 26, 2026 · PreprintSystems Biology

Long-term mitigation of the foreign-body response with dexamethasone-eluting cochlear implants in mice

Aditya Alluri, Bryce Hunger, md Fahad Hossain, Shakila Mahmuda Fatima, Muhammad Taifur Rahman, Brian J. Mostaert, Robert D. Gay, Ya Lang Enke, Marlan Rex Hansen, Alexander D. Claussen

This study shows dexamethasone-eluting cochlear implants reduce and sustainably suppress the foreign-body response in mice over 336 days, with reduced fibrosis and immune infiltration.

bioRxiv · Sep 1, 2026 · PreprintNeuroscience

Supervised Automation of Cell Counting in Confocal Microscopic Cochlear Imaging Datasets Using Macro in Imaris

Muhammad Taifur Rahman, Nashwaan Ali Khan, Mobin Ibne Mokbul, Ibrahim Razu, Shakila Mahmuda Fatima, Samia Sultana Lira, Cristina Garcia, Peter Eckard, Marlan Rex Hansen

The paper develops a supervised automation protocol in Imaris to streamline cell counting in confocal cochlear images, reducing manual effort and human error.

bioRxiv · Jul 24, 2024 · PreprintImmunology