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GenomicsbioRxiv
Preprint

Pan-cancer scale landscape of simple somatic mutations

Nan ZhouiD, Blanca Gallego, Jinku BaoiD, Guy TsafnatiD

Abstract

Genome is the carrier of somatic mutations during the development of cancer. The catalogue of simple somatic mutations (SSM) is a subgroup of somatic mutations. It includes single base substitutions, small deletions and insertions of T substitutions at NpCpG trinucleotide contexts. Skin cancer showed distinct mutational spectra. Breast cancer, bladder cancer, and cervical cancer were found to have similar mutational spectra. Acute myeloid leukemia and lung cancer from South Korea, and colorectal cancer from China show high density of single base substitutions per mega base in chromosome Y. To sum up, our study and findings will be thought provoking in studying SSM in cancer.

PDFDOI

02 /Specification & Classification

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