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bioRxivGenomics

Single molecule targeted sequencing for cancer gene mutation detection

Yan Gao, Liwei DengiD, Qin YaniD, Yongqian Gao, Zengding Wu, Jinsen CaiiD, Daorui Ji, Gailing LiiD, Ping Wu, Huan Jin, Luyang ZhaoiD, Song Liu, Michael W Deem, Jiankui HeiD

PDFDOIPreprint

Abstract

With the rapid decline cost of sequencing, it is now clinically affordable to examine multiple genes in a single disease-targeted test using next generation sequencing. Current targeted sequencing methods require a separate step of targeted capture enrichment during sample preparation before sequencing, and the library preparation process is labor intensive and time consuming. Here, we introduced an amplification-free Single Molecule Targeted Sequencing (SMTS) technology, which combined targeted capture and sequencing in one step. We demonstrated that this technology can detect low-frequency mutations of cancer genes. SMTS has several advantages, namely that it requires little sample preparation and avoids biases and errors introduced by PCR reaction. SMTS can be applied in cancer gene mutation detection, inherited condition screening and noninvasive prenatal diagnosis.

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