Energy-precision trade-off in mitotic oscillators revealed by ATP modulation in artificial cells
Shiyuan WangiD, Liam Yourston, Gembu MaryuiD, Yeonghoon Kim, Derek Walker, Usha KadiyalaiD, Qiong YangiD
Abstract
The temporal precision of biochemical oscillators is fundamentally constrained by the energy dissipated to suppress molecular fluctuations, a widely predicted trade-off governing information processing across biology and physics, from molecular motors to kinetic proofreading to computing. Yet, experimental validation in complex biological oscillators remains elusive due to challenges of systematically modulating energy while quantifying stochastic dynamics across large ensembles. Here, we establish a high-throughput droplet-microfluidics platform to reconstitute mitotic oscillations from Xenopus laevis egg extracts within thousands of sub-nanoliter compartments. By precisely tuning ATP across a broad free-energy landscape and developing an analytical framework that decouples intrinsic phase diffusion from quenched period heterogeneity, we uncover a hidden trade-off linking metabolic budget, oscillation speed, and precision. While speed peaks non-monotonically near physiological ATP levels and declines toward both high and low bifurcation limits, precision increases monotonically with energy. These findings provide direct experimental evidence that mitotic timing is actively shaped by energy budgets. Intriguingly, embryonic cell cycles are not optimized for maximum fidelity, but for a metabolic compromise maintaining just enough coherence for synchronous yet rapid divisions, placing the endogenous ATP budget near an energetic optimum balancing speed and accuracy. Our integrated artificial-cell and analytical strategy provides a generalizable framework for mapping thermodynamic limits in non-equilibrium biological dynamics.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 1
- Organism
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- A robust and tunable mitotic oscillator in artificial cells
Ye Guan, Zhengda Li, … Qiong Yang·eLifePeer-reviewed·Apr 5, 2018
- Time-dynamics of mitochondrial membrane potential reveal an inhibition of ATP synthesis in mitosis
J. Ho Kang, G. Katsikis, … T. P. Miettinen·bioRxiv·Sep 18, 2019
- Bimodal Coupling Optimization in Biological Rhythms: Balancing Energy Efficiency and Functional Demand
Jiajun Zhang, Ji Han, Liang‐Liang Xie·bioRxiv·Mar 28, 2026
- Beat-locked ATP microdomains in the sinoatrial node map a calcium-timed energetic hierarchy and regional pacemaker roles
Manuel F. Muñoz, Collin Matsumoto, … Luis Fernando Santana·The Journal of General PhysiologyPeer-reviewed·Mar 31, 2026
- Demonstration of Beat-to-Beat, On-Demand ATP Synthesis in Ventricular Myocytes Reveals Sex-Specific Mitochondrial and Cytosolic Dynamics.
Paula Rhana, Collin Matsumoto, Luis Fernando Santana·bioRxiv·Jul 7, 2025
- Single-cell metabolic oscillations are pervasive and may alleviate a proteome constraint
Arin Wongprommoon, Alán F. Muñoz, … Peter S. Swain·bioRxiv·Nov 25, 2024