DNA: A Nanoscale Archimedes Screw
Xavier MlezivaiD, Christopher MaffeoiD, Aleksei AksimentieviD
Abstract
Rotating helices have been utilized for many purposes, including the transport of solid material and fluids within man-made machines, for a little over two millennia. Here, we show that the rotation of a biological helical molecule--a DNA duplex--can move water and ions through a nanoscale pore. While the rotation-induced flow of water is generated by the steric shape of the DNA molecule, an even faster transport of cations is caused by electrostatic interactions. The rotation-induced ion flux is found to depend on the cation type, offering potential utility for ion separation. Finally, we show that the torque-driven duplex can move ions against a concentration gradient, realizing the Archimedes screw principle at the nanoscale. O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=84 SRC="FIGDIR/small/734429v1_ufig1.gif" ALT="Figure 1"> View larger version (29K): org.highwire.dtl.DTLVardef@14e2829org.highwire.dtl.DTLVardef@2ebc37org.highwire.dtl.DTLVardef@46d16forg.highwire.dtl.DTLVardef@1600c19_HPS_FORMAT_FIGEXP M_FIG C_FIG
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 0
- FWCI
- 0.00
- Field percentile
- 37th percentile
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- DNA double helix, a tiny electromotor
C. Maffeo, L. Quednau, … A. Aksimentiev·bioRxiv·Jun 13, 2022
- The ion permeability of DNA nanotube channels
N. N. Dhanasekar, Y. Li, R. Schulman·bioRxiv·Mar 4, 2022
- Nanopore translocation reveals electrophoretic force on non-canonical RNA:DNA double helix
F. N. Boskovic, C. Maffeo, … U. F. Keyser·bioRxiv·Sep 12, 2023
- Breaking Pore Symmetry to Prolong DNA Residence in Solid-State Nanopores
Simran Nasa, Pranjal Sur, … Manoj M. Varma·bioRxiv·Sep 22, 2026
- The Origin of Conductive-Pulse Sensing Inside a Nanopore and the Role of Electro-Hydrodynamics
L. Lastra, M. Nguyen, … K. J. Freedman·bioRxiv·Sep 25, 2020
- From Brownian to deterministic motor movement in a DNA-based molecular rotor
F. Rothfischer, M. Vogt, … F. C. Simmel·bioRxiv·Jan 26, 2024