npj Systems Biology and ApplicationsCancer BiologyPeer-reviewed journal article
Identifying genes underlying parallel evolution of stromal resistance to placental and cancer invasion
Yasir SuhailiD, Wenqiang DuiD, Junaid M. AfzaliD, Günter P. WagneriD, Kshitiz GuptaiD
Abstract
Stromal regulation of cancer dissemination is now well recognized, however causal stromal genes and factors have yet not been identified. Placental invasion into endometrial stroma phenotypically is similar to cancer dissemination. There are also vast differences in the extent of placental invasion across mammals, with human pregnancies at the higher extreme end of invasiveness. We have previously demonstrated that epitheliochorial species, characterized by non-invasive placentation, have acquired stromal resistance to placental invasion, correlating with low cancer malignancy rates. Similarly, decidualization of human endometrial fibroblasts confers resistance to placental invasion. We hypothesized that both trajectories may convergently use similar pathways, using endometrial fibroblasts from 9 species to identify putative ELI-D1 genes underlying stromal vulnerability to invasion. ELI-D1 were negatively enriched in T1-T2 stage transition in many human cancers, typically preceding dissemination, bioinformatically validating their contribution to dissemination-preceding fibroblast activation in cancers. Finally, we have identified candidate transcriptional regulators underlying variation in ELI-D1 genes across eutherians, functionally showing that a key transcriptional regulator of ELI-D1 genes across species, Nr2f6, can regulate stromal resistance to invasion in human fibroblasts. Our comparative approach provides us with a putative, limited, gene-set linked to stromal vulnerability in human cancers, providing therapeutic opportunities to target cancer dissemination.
- organism: human
- organism: mouse
- organism: rat
- assay: bulk RNA-seq
- research focus: gene regulatory network inference
- research focus: cell type annotation
- approach: comparative / phylogenetic analysis
- approach: biophysical modeling
- Citations
- 0
- FWCI
- 0.00
- Field percentile
- 21th percentile
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- The Evolution of Placental Invasion and Cancer Metastasis are Causally Linked
K. Gupta, J. Afzal, … G. P. Wagner·bioRxiv·Jan 23, 2019
- Cis-Regulatory Differences Explaining Evolved Levels of Endometrial Invasibility in Eutherian Mammals
Y. Suhail, J. D. Maziarz, … Kshitiz·bioRxiv·Sep 4, 2020
- Placental invasion mismatch underlines pregnancy disorders and cancers
Xin Li, Ruixue Chen, … Guojie Zhang·bioRxiv·Jul 11, 2026
- Experimental and Phylogenetic Evidence for Correlated Gene Expression Evolution between Dermal and Endometrial Fibroblasts: implications for the evolution of cancer malignancy
A. Dighe, J. Maziarz, … G. P. Wagner·bioRxiv·Jul 8, 2023
- Post-EMT: Cadherin-11 mediates cancer hijacking fibroblasts
- Modeling the effects of EMT-immune dynamics on epithelial cancer progression
Daniel R. Bergman, Matthew K. Karikomi, … Adam L. MacLean·bioRxiv·May 30, 2020