Bioinformatics Workflow Management With The Wobidisco Ecosystem

Sébastien Mondet; Bülent Arman Aksoy; Leonid Rozenberg; Isaac Hodes; Jeff Hammerbacher

doi:10.1101/213884

BioinformaticsbioRxivNov 7, 2017

Preprint

Bioinformatics Workflow Management With The Wobidisco Ecosystem

Sébastien Mondet iD, Bülent Arman Aksoy iD, Leonid Rozenberg iD, Isaac Hodes iD, Jeff Hammerbacher iD

Abstract

ReferencesTo conduct our computational experiments, our team developed a set of workflow-management-related projects: Ketrew, Biokepi, and Coclobas. The family of tools and libraries are designed with reliability and flexibility as main guiding principles. We describe the components of the software stack and explain the choices we made. Every piece of software is free and open-source; the umbrella documentation project is available at https://github.com/hammerlab/wobidisco.

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