Author

Sébastien Mondet

Icahn School of Medicine at Mount SinaiORCID 0000-0003-4833-4221Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:software / tool· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-exome sequencing· 1

Frequent Co-Authors

Bülent Arman AksoyiD· 2 shared Isaac HodesiD· 2 shared Jeff HammerbacheriD· 2 shared Alex RubinsteyniD· 1 shared John P. FinniganiD· 1 shared Julia KodyshiD· 1 shared Leonid RozenbergiD· 1 shared Nina BhardwajiD· 1 shared

Activity by Year

2017-2018 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 24 mutual co-author links

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2 shared papersBioinformatics

Bülent Arman AksoyORCID

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2 papers

Recent·Most cited

BioinformaticsFrontiers in ImmunologyPeer-reviewedJan 18, 2018

Computational pipeline for the PGV-001 neoantigen vaccine trial

Alex Rubinsteyn, Julia Kodysh, Isaac Hodes…·Jeff Hammerbacher

The paper describes a computational pipeline for a personalized neoantigen vaccine trial, including tools for variant calling, peptide selection, and sequence reconstruction.

74 citations

humanwhole-exome sequencing

𝕏 PostBluesky

BioinformaticsbioRxivPreprintNov 7, 2017

Bioinformatics Workflow Management With The Wobidisco Ecosystem

Sébastien Mondet, Bülent Arman Aksoy, Leonid Rozenberg…·Jeff Hammerbacher

The paper introduces a set of open-source workflow management tools for bioinformatics, emphasizing reliability and flexibility.

6 citations

experimental assaysoftware / tool

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