Journal of The Royal Society InterfaceBiophysicsPeer-reviewed journal article
Distinct evolutionary patterns of tumor immune escape and elimination determined by ECM architectures
Abstract
Cancer progression remains a significant clinical challenge. Phenotypic adaptation by tumor cells results in disease hetero-geneity, which drives treatment resistance and immune escape. T cell immunotherapy, while effective at treating some cancer subtypes, can also fail due to limits on tumor immunogenicity or T cell recognition. For example, one potential contributor to immune escape involves the density and alignment of the extracellular matrix (ECM) surrounding tumors, also known as Tumor-Associated Collagen Signature (TACS). However, the specific mechanisms by which aligned fibers contribute to decreased patient survival rates have not yet been decoupled. Here, we developed our EVO-ACT (EVOlutionary Agent-based Cancer T cell interaction) model to study how TACS affects tumor evolution and dynamic tumor-T cell interactions. We identified a variety of TACS-specific dynamical features that influence T cell infiltration, cancer immunoediting, and ultimate immune escape. Our model demonstrates how TACS and phenotypic adaptation together explain overall survival trends in breast cancer.
- organism: human
- research focus: cancer & tumor microenvironment
- research focus: cell signaling & trafficking
- research focus: development & morphogenesis
- approach: deep learning
- approach: statistical model
- Citations
- 5
- FWCI
- 2.77
- Field percentile
- top 10%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Modeling the effects of EMT-immune dynamics on epithelial cancer progression
Daniel R. Bergman, Matthew K. Karikomi, … Adam L. MacLean·bioRxiv·May 30, 2020
- Spatial interactions modulate tumor growth and immune infiltration
S. Marzban, S. Srivastava, … J. West·bioRxiv·Jan 10, 2024
- Sustained Co-evolution in a Stochastic Model of the Cancer-Immune Interaction
J. T. George, H. Levine·bioRxiv·Jun 23, 2019
- Extracellular matrix educates a tumor macrophage phenotype found in ovarian cancer metastasis
E. H. Puttock, E. J. Tyler, … O. M. T. Pearce·bioRxiv·Aug 11, 2022
- Extrachromosomal DNA is associated with decreased immune cell infiltration and antigen presentation, represents a potential cancer immune evasion mechanism
- Immune evasion and immunotherapy resistance via TGF-beta activation of extracellular matrix genes in cancer associated fibroblasts
Ankur Chakravarthy, Lubaba Khan, … Daniel D. De Carvalho·bioRxiv·Feb 15, 2018