bioRxivBiochemistryPreprint
APE1 associates with 60S ribosomes and tRNAs and regulates the expression of IGF2BP1
Abstract
Apurinic/apyrimidinic endonuclease 1 (APE1), a multifunctional protein known for its DNA repair function and redox regulation, is often found overexpressed in cancers. APE1 can be found in the nucleus, cytoplasm and secreted extracellularly. APE1 subcellular distribution in the cytoplasm is frequently reported in various types of cancer but the biological significance remains unknown. In this study, APE1 in the cytoplasm of HepG2 cells was investigated using various techniques including microscopy, differential centrifugation, sucrose gradient fractionation and CL-IP. APE1 was found to associate with 60S ribosomes and tRNAs under native conditions, suggesting it may have a specific function in the translational machinery. Knockdown of APE1 in HepG2 cells led to increased protein expression of IGF2BP1 as well as enhanced HepG2 cell migration, suggesting that APE1 can act as a tumor suppressor in this cell line model of hepatocellular carcinoma. When APE1 was depleted, the translation of a reporter construct containing the 3UTR of IGF2BP1 was enhanced. This study provides evidence in support of the role of cytoplasmic APE1 in the control of IGF2BP1 protein translation and sheds light on the potential novel function of cytoplasmic APE1.
- organism: human
- assay: proteomics
- research focus: protein folding & dynamics
- approach: experimental assay
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- The DNA-repair protein APE1 participates with hnRNPA2B1 to motif-enriched and prognostic miRNA secretion
Giovanna Mangiapane, Michela Notarangelo, … Gianluca Tell·OncogenePeer-reviewed·Apr 25, 2024
- IGF2BP2 Promotes Cancer Progression by Degrading the RNA Transcript Encoding a v-ATPase Subunit
A. Latifkar, F. Wang, … M. A. Antonyak·bioRxiv·Apr 1, 2021
- Nucleolar accumulation of APE1 through condensates is mediated by rRNA forming G-quadruplex structures
Giuseppe Dall’Agnese, Nancy M. Hannett, … Gianluca Tell·bioRxiv·Mar 4, 2024
- The Apurinic/Apyrimidinic Endodeoxyribonuclease 1 is an RNA G-quadruplex binding protein and regulates miR-92b expression in cancer cells
Alessia Bellina, Matilde Clarissa Malfatti, … Gianluca Tell·bioRxiv·Feb 22, 2024
- Proteomic analysis identifies novel binding partners of BAP1
R. Baas, F. J. van der Wal, … T. K. Sixma·bioRxiv·Mar 3, 2021
- Targeting APEX2 to the mRNA encoding fatty acid synthase β in yeast identifies proteins that bind and control its translational efficiency in the cell cycle
Heidi M. Blank, Wendell P. Griffith, Michael Polymenis·Molecular Biology of the CellPeer-reviewed·Oct 4, 2023