bioRxivPlant Biology
Identification of Alkaloids and Related Intermediates of Dendrobium officinale by Solid-Phase Extraction Coupled with High-Performance Liquid Chromatography Tandem Mass Spectrometry
Abstract
JA signaling plays a pivotal role in plant stress responses and secondary metabolism. Many studies have demonstrated that jasmonates effectively induce the expressions of alkaloid biosynthesis genes in various plants, which rendered to the accumulation of alkaloid to counteract stresses. Despite the multiple roles of jasmonate (JA) in the regulation of plant growth and different stresses, less studied involved in the regulatory role of JA in D. officinale alkaloids. A strategy for the rapid identification of alkaloid and the intermediates of D. officinale was established based on a solid-phase extraction coupled with high-performance liquid chromatography tandem mass spectrometry method. By using SPE-HPLC-LTQ-Orbitrap method, the potential compounds were tentatively identified by aligning the accurate molecular weight with the METLIN and Dictionary of Natural Products databases. The chemical structures and main characteristic fragments of the potential compounds were further confirmed by retrieving the multistage mass spectra from the MassBank and METLIN databases.The Mass Frontier software was used to speculate the fragmentation pathway of the identified compounds. Seven alkaloids were separated and identified from D. officinale, which were mainly classified into five types (tropane alkaloids, tetrahydroisoquinoline alkaloids, quinolizidine alkaloids, piperidine alkaloids and spermidine alkaloids). Besides the alkaloids, forty-nine chemical substances, including guanidines, nucleotides, dipeptides, sphingolipids and nitrogen-containing glucosides, were concurrently identified. These findings gives the composition of chemicals currently found in D. officinale, which could provide the scientific method for the identification of alkaloids in other Dendrobium plants.
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Integrative metabolomics reveal the organisation of alkaloid biosynthesis in Daphniphyllum macropodum
K. Eljounaidi, B. Radzikowska, … B. R. Lichman·bioRxiv·May 25, 2022
- Stable isotope-assisted computational mass spectrometry reveals root-specific alkaloids in Glycyrrhiza species
Keita Sawai, Yoshimasa Todoroki, … Hiroshi Tsugawa·bioRxiv·May 8, 2026
- Multi-metabolomics using imaging mass spectrometry and liquid chromatography-tandem mass spectrometry for spatially characterizing monoterpene indole alkaloids secreted from roots
R. Nakabayashi, N. Takeda-Kamiya, … K. Saito·bioRxiv·Jan 15, 2021
- Exploring Effective Ingredients and Potential Mechanisms of Stem Cell-derived Dendrobium Officinale Extract in Treatment of Allergic Rhinitis
Jiangning Li, Jie Zhang, Ken Cheng·bioRxiv·Apr 18, 2025
- Herbicidal Quassinoids Isolated from Ailanthus altissima Leaves
Y. Kim, S.-S. Moob, J. S. Choi·bioRxiv·Nov 10, 2023
- Interactomics-driven discovery of alkaloid biosynthetic pathways in kratom
Bo Yang, Samuel Kemiji, … Sijin Li·bioRxiv·May 5, 2026