iScienceSystems BiologyPeer-reviewed journal article
Trans-omic analysis reveals opposite metabolic dysregulation between feeding and fasting in liver associated with obesity
Yunfan BaiiD, Keigo MoritaiD, Toshiya KokajiiD, Atsushi HatanoiD, Satoshi OhnoiD, Riku Egami, Yifei Pan, Dongzi LiiD, Katsuyuki YugiiD, Saori UematsuiD, Hiroshi InoueiD, Yuka InabaiD, Yutaka SuzukiiD, Masaki MatsumotoiD, Masatomo TakahashiiD, Yoshihiro IzumiiD, Takeshi BambaiD, Akiyoshi HirayamaiD, Tomoyoshi SogaiD, Shinya KurodaiD
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- top 24%
Abstract
Dysregulation of liver metabolism associated with obesity during feeding and fasting leads to the breakdown of metabolic homeostasis. However, the underlying mechanism remains unknown. Here, we measured multi-omics data in the liver of wild-type and leptin-deficient obese (ob/ob) mice at ad libitum feeding, and constructed a differential regulatory trans-omic network of metabolic reactions. We compared the trans-omic network at feeding with that at 16 h-fasting constructed in our previous study. Intermediate metabolites in glycolytic and nucleotide metabolism decreased in ob/ob mice at feeding but increased at fasting. Allosteric regulation reversely shifted between feeding and fasting, generally showing activation at feeding while inhibition at fasting in ob/ob mice. Transcriptional regulation was similar between feeding and fasting, generally showing inhibiting transcription factor regulations, activating enzyme protein regulations in ob/ob mice. The opposite metabolic dysregulation between feeding and fasting characterizes breakdown of metabolic homeostasis associated with obesity.
- organism: mouse
- assay: bulk RNA-seq
- research focus: gene regulatory network inference
- approach: statistical model
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