Prediction and Classification of the Uptake and Disposition of Antidepressants and New CNS-Active Drugs in the Human Brain using the ANDROMEDA by Prosilico Software and Brainavailability-Matrix
Abstract
AO_SCPLOWBSTRACTC_SCPLOWO_ST_ABSBackgroundC_ST_ABSPassive blood-brain barrier permeability (BBB Pe), fraction bound to brain tissue (fb,brain) and efflux by transport proteins MDR-1 and BCRP are essential determinants for the brain uptake and disposition of drugs. MethodsThe main objective of the study was to use the software ANDROMEDA by Prosilico to predict passive BBB Pe- and fb,brain-classes and MDR-1- and BCRP-specificities for various classes of antidepressants and for CNS-active small drugs marketed during 2020 and 2021, and then to position them according to a new 2-dimensional Brainavailability-Matrix (8 passive BBB Pe x 4 fb,brain classes, where class 11 has highest and 84 lowest values/brainavailability). Predicted estimates were used, except for cases where measured values were available. Results and ConclusionResults for 53 drugs show that adequate CNS uptake and disposition are achieved for compounds placed in the zones for low, moderate and high brainavailability, despite efflux. They also show that high brainavailability and efflux are common for CNS-active drugs and that modern CNS-active drugs generally have lower brainavailability than older antidepressive drugs. Furthermore, they demonstrate that ANDROMEDA by Prosilico and the new Brainavailability-Matrix are applicable for prediction, optimization and positioning of CNS uptake and disposition of drugs and drug candidates in man.
02 /Specification & Classification
Click any tag to browse matching papersReproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Evaluation of the reliability and applicability of human unbound brain-to-plasma concentration ratios
U. Fagerholm·bioRxiv·Nov 14, 2022
- Exploring Kp,uu,BBB Values Smaller than Unity in Remoxipride: A Physiologically-Based CNS Model Approach Highlighting Brain Metabolism in Drugs with Passive Blood-Brain Barrier Transport
Mengxu Zhang, Ilona M. Vuist, … Elizabeth C. M. de Lange·European Journal of Pharmaceutical SciencesPeer-reviewed·Aug 22, 2024
- BBB-Nuke: Transport-Aware Prediction of Blood-Brain Barrier Penetration in Small Molecules
Noah Abasciano, Hamid Hadipour, … Temitope Sobodu·bioRxiv·Jul 14, 2026
- BBBP_Atlas: Unified Interpretable Modeling of Blood Brain Barrier Permeability across Small Molecules and Peptides
- Pharmacodynamic profiles inform systematization, efficacy and whole-brain drug distribution profiles in 18 antidepressants
Benjamin Hänisch, Sofie Louise Valk·bioRxiv·Apr 29, 2026
- Fingerprint-Based Explainable Machine Learning for Predicting Blood--Brain Barrier Permeability
Nilanjan Panda, Sutirtha Panda·bioRxiv·Oct 25, 2025