BioinformaticsBioinformaticsPeer-reviewed journal article
VARAN-GIE: Curation of Genomic Interval Sets
Abstract
Genomic interval sets are fundamental elements of genome annotation and are the output of countless bioinformatics applications. Nevertheless, tool support for the manual curation of these data is currently limited. We developed VARAN-GIE, an extension of the popular Integrative Genomics Viewer (IGV) that adds functionality to edit, annotate and merge genomic interval sets. Data can easily be shared with other users and imported/exported from/to multiple common data formats. VARAN-GIE binary releases, source-code, user guides and tutorials are available at https://github.com/popitsch/varan-gie/
- Citations
- 4
- FWCI
- 0.18
- Field percentile
- 48th percentile
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