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BioinformaticsF1000Research
Peer-reviewed journal article

pdb-tools: a swiss army knife for molecular structures

João RodriguesiD, João M. C. TeixeiraiD, Mikael E. TrelletiD, Alexandre M. J. J. BonviniD

Abstract

The pdb-tools are a collection of Python scripts for working with molecular structure data in the PDB format. They allow users to edit, convert, and validate PDB files, from the command-line, in a simple but efficient manner. The pdb-tools are implemented in Python, without any external dependencies, and are freely available under the open-source Apache License at https://github.com/haddocking/pdb-tools/ and on PyPI (https://pypi.org/project/pdb-tools/).

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02 /Specification & Classification

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