A simplified two-plasmid system for orthogonal control of gene expression using light-activated CRISPR effector for mammalian cells
Shruthi Satya GarimellaiD, Shiaki A. MinamiiD, Anusha N Khanchandani, Justin C. Abad SantosiD, Susannah R. Schaffer, Priya S. ShahiD
Abstract
BackgroundOptogenetic systems use light-responsive proteins to control gene expression with the "flip of a switch". One such tool is the light activated CRISPR effector (LACE) system. Its ability to regulate gene expression in a tunable, reversible, and spatially resolved manner makes it attractive for many applications. However, LACE relies on delivery of four separate components on individual plasmids, which can limit its use. Here, we optimize LACE to reduce the number of plasmids needed to deliver all four components. ResultsThe two-plasmid LACE (2pLACE) system combines the four components of the original LACE system into two plasmids. Following construction, the behavior of 2pLACE was rigorously tested using optogenetic control of enhanced green fluorescent protein (eGFP) expression as a reporter. We optimized the ratio of the two plasmids, measured activation as a function of light intensity, and determined the frequency of the light to activate the maximum fluorescence. Overall, the 2pLACE system showed a similar dynamic range, tunability, and activation kinetics as the original four plasmid LACE (4pLACE) system. Interestingly, 2pLACE also had less variability in activation signal compared to 4pLACE. ConclusionsThis simplified system for optogenetics will be more amenable to biotechnology applications where variability needs to be minimized. By optimizing the LACE system to use fewer plasmids, 2pLACE becomes a flexible tool in multiple research applications.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 3
- FWCI
- 0.83
- Field percentile
- top 32%
- Organism
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Transient light-activated gene expression in Chinese hamster ovary cells
S. A. Minami, P. S. Shah·bioRxiv·Oct 22, 2020
- OptoCRISPRi-HD: engineering a green-light activated CRISPRi system with high dynamic range
Ke-Ning Chen, Bin‐Guang Ma·bioRxiv·Dec 31, 2022
- Development of an optogenetic gene expression system in Lactococcus lactis using a split photoactivatable T7 RNA polymerase
Aleixandre Rodrigo‐Navarro, Manuel Salmerón‐Sánchez·bioRxiv·Jan 5, 2024
- An open-hardware platform for optogenetics and photobiology
Karl Gerhardt, Evan Olson, … Jeffrey Tabor·bioRxiv·May 24, 2016
- Light-dependent Control of Bacterial Expression at the mRNA Level
A. Ranzani, M. Wehrmann, … A. Moeglich·bioRxiv·Jul 30, 2022
- Photocaged FLP Recombinase for Precise Spatio-temporal Control of Gene Expression
Jose Javier Vazquez Rodriguez, Kieran Baxter, … Sebastian Greiss·Nucleic Acids ResearchPeer-reviewed·Mar 19, 2026