Scientific ReportsCancer BiologyPeer-reviewed journal article
DUSP6 is upregulated in metastasis and influences migration and metabolism in pancreatic cancer cells
Mariana T. RuckertiD, R. McKinnon Walsh, Bailey A. ByeiD, Austin E. EadesiD, Wei YaniD, Filip BednariD, Jiaqi ShiiD, Emily L. Lasse OpsahliD, Marina Pasca di MaglianoiD, Costas Andreas LyssiotisiD, Michael Nathan VanSauniD, Vanessa S. SilveiraiD
Abstract
Pancreatic ductal adenocarcinoma (PDAC) is a highly aggressive malignancy characterized by KRAS mutations in approximately 95% of cases. Despite recent advancements with KRAS inhibitors, therapeutic resistance has emerged, and combination approaches are needed. In particular, it is important to understand how downstream signaling of KRAS supports PDAC growth. For example, DUSP6, a dual-specificity phosphatase that modulates ERK1/2 phosphorylation and RAS pathway activity, has emerged as an important regulator of KRAS-MAPK signaling. Transcriptomic analyses demonstrate that DUSP6 is markedly overexpressed in PDAC tumors compared to non-tumoral pancreatic tissue. Single-cell RNA-seq reveals its upregulation in epithelial tumor cells, with further elevation in metastatic lesions relative to primary tumors. This upregulation correlates with the quasi-mesenchymal/squamous molecular subtype, and clinically, high DUSP6 expression is associated with poorer overall survival. Gene set enrichment analyses of metastatic samples indicate that DUSP6 is linked to pathways involved in cell migration and metabolism. To elucidate DUSP6s functional roles, stable knockdown of DUSP6 in PDAC cell lines resulted in increased ERK/MAPK activation and altered migratory capacity. Metabolic profiling showed enhanced basal glycolysis following DUSP6 suppression. However, combined inhibition of glycolysis and DUSP6 downregulation did not affect the migratory phenotype, indicating that glycolytic alterations do not drive migration. These findings highlight the dual and independent roles of DUSP6 in modulating migratory capacity and glycolysis in PDAC. This study underscores the significance of DUSP6 as a potential therapeutic target and provides new insights into its contributions to PDAC progression. SIGNIFICANCE STATEMENTDUSP6 plays dual and independent roles in pancreatic cancer, regulating both migration and glycolysis. Its upregulation in metastasis is associated with poor prognosis and more aggressive phenotypes, highlighting its clinical relevance. Targeting DUSP6 represents a potential therapeutic strategy to disrupt KRAS-MAPK signaling and target key pathways driving PDAC progression.
- organism: human
- assay: bulk RNA-seq
- assay: proteomics
- research focus: cell type annotation
- research focus: differential expression
- research focus: gene regulatory network inference
- approach: experimental assay
- Citations
- 4
- FWCI
- 1.52
- Field percentile
- top 15%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Targeting glucose metabolism sensitizes pancreatic cancer to MEK inhibition
- PP2A activation drives aberrant macropinocytosis and cell death in pancreatic ductal adenocarcinoma
Garima Baral, Claire M. Pfeffer, … Brittany L. Allen-Petersen·bioRxiv·Jul 14, 2025
- Activation of PP2A-B56α leads to aberrant EGFR signaling and proliferative phenotypes in PDAC
Claire M. Pfeffer, Sydney J. Clifford, … Brittany L. Allen-Petersen·bioRxiv·Jul 18, 2025
- KRAS-mediated upregulation of CIP2A promotes suppression of PP2A-B56α to initiate pancreatic cancer development
S. L. Tinsley, R. A. Shelley, … B. Allen-Petersen·bioRxiv·Jul 1, 2023
- DUSP28 is a novel biomarker responsible for aggravating malignancy via the autocrine signaling pathways in metastatic pancreatic cancer
- Mena (ENAH) Promotes KRAS-Driven Tumor Growth and Metastatic Progression in Pancreatic Ductal Adenocarcinoma
Lina A. Ariyan, Érika Pereira Zambalde, … John Christopher McAuliffe·bioRxiv·Jan 8, 2026