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GenomicsbioRxiv
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Resolving human neuronal herpesvirus reactivation via petabase-scale association studies

Jacob C. GutierreziD, Yifan CheniD, Artem BabaianiD, Ryan S. DhindsaiD, Caleb A. LareauiD

Abstract

Mounting evidence implicates herpesvirus reactivation in the etiology of Alzheimers disease, yet we lack a refined molecular characterization of pathogenesis in neurodegeneration. Here, we mine over 10 petabytes of human sequencing data for viral transcripts, identifying recurrent herpes simplex virus 1 (HSV-1) reactivation in healthy but not pathological post-mortem human brain tissue. Integrative single-nucleus analyses resolve direct evidence of HSV-1 expression in RORB+ glutamatergic neurons, implicating viral reactivation in a neuronal population progressively lost during dementia.

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