Journal of Psychiatry and NeuroscienceNeurosciencePeer-reviewed journal article
Polygenic risk for depression and resting state functional connectivity of subgenual anterior cingulate cortex in young adults
Yu CheniD, Huey-Ting Li, Xingguang Luo, Guangfei LiiD, Jaime S. IdeiD, Chiang-Shan Ray LiiD
Abstract
Genetic variants may confer risks for depression by modulating brain structure and function. Prior evidence has underscored a key role of the subgenual anterior cingulate cortex (sgACC) in depression. Here, we built on the literature and examined how the resting state functional connectivity (rsFC) of the sgACC was associated with polygenic risks for depression. We followed published routines and computed seed-based whole-brain sgACC rsFC and polygenic risk scores (PRS) of 717 young adults curated from the Human Connectome Project. We performed whole-brain regression against PRS and severity of depression symptoms in a single model for all subjects and for men and women alone, controlling for age, sex (for all), race, severity of alcohol use, and household income, and evaluated the results at a corrected threshold. We found lower sgACC rsFC with the default mode network and frontal regions in association with PRS and lower sgACC-cerebellar rsFC in association with depression severity. We also noted sex differences in the connectivity correlates of PRS and depression severity. In an additional set of analyses, we observed a significant correlation between PRS and somatic complaints score and altered sgACC-somatosensory cortical connectivity in link with the severity of somatic complaints. Our findings collectively highlighted the pivotal role of distinct sgACC-based networks in the genetic predisposition to depression and the clinical manifestation of depression. Distinguishing the risk from severity markers of depression may have implications in developing early and effective treatments for individuals at risk for depression.
- organism: human
- assay: electronic health records
- research focus: GWAS / association mapping
- approach: statistical model
- Citations
- 13
- FWCI
- 6.81
- Field percentile
- top 2%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Functional Inputs to the Subgenual Cingulate Cortex Distinguish Neurotypical Individuals with Severe and Mild Depressive Problems: Granger Causality and Clustering Analyses
Huey-Ting Li, Yu Chen, … Chiang-Shan Ray Li·bioRxiv·Jun 25, 2025
- Changes in anterior cingulate connectivity associated with response to antidepressant treatment for major depressive disorder
Choi Sze Tracy Lam, Manuel Kuhn, … Diego A. Pizzagalli·bioRxiv·Nov 9, 2026
- A glucocorticoid-responsive polygenic signature in the anterior cingulate cortex moderates the association of early-life adversity and vulnerability for depression
Danusa Mar Arcego, Irina Pokhvisneva, … Michael J. Meaney·bioRxiv·Jan 14, 2026
- Novel polygenic risk score links depression-related cortical transcriptomic changes to brain morphology and symptom severity
Amy E. Miles, Fernanda C. Dos Santos, … Yuliya S. Nikolova·NeuropsychopharmacologyPeer-reviewed·Sep 29, 2021
- Subgenual Anterior Cingulate Cortex Functional Connectivity Abnormalities in Depression: Insights from Brain Imaging Big Data and Precision-Guided Personalized Intervention via Transcranial Magnetic Stimulation
Xiao Chen, Bin Lü, … Kai Wang·中国科学通报:英文版Peer-reviewed·Jun 4, 2025
- Stratifying major depressive disorder by polygenic risk for schizophrenia in relation to structural brain measures
Mathew A. Harris, Xueyi Shen, … Heather Clare Whalley·Psychological MedicinePeer-reviewed·Jul 18, 2019