Sign in
BiophysicsbioRxiv
Preprint

Blind Recognition Reveals Early Multiphase IL-1ra Aggregation

Andrei A. Raibekas

Abstract

The primary question in this work is whether a turbidity trace contains more than one resolved kinetic event before any rate or aggregate-mass information is supplied. A blind, three-gate hierarchical Gompertz procedure applied to human interleukin-1 receptor antagonist (IL-1ra) at 53 {degrees}C in phosphate retained one phase at 1 and 2 mg/mL, but selected two phases at 5 and 10 mg/mL. Thus the first resolved multiphase behavior appears at the low protein concentration of 5 mg/mL. Source optical-rate markers were withheld until after selection. Those observed optical rates were then compared with blind-fit phase rates, and the same comparison was expressed on a conditional mass-equivalent scale using the published 5.3-fold Type-I/Type-II turbidity response ratio. A separate 50 {degrees}C citrate series (4, 6, 8, 10, and 14 mg/mL) also selected two phases in every retained trace; its printed Vmax values were used only as post-selection comparators. Finally, two challenging 40 {degrees}C high-concentration traces (180 and 200 mg/mL) were digitized from the instrument-output plot and each retained two phases. All three conditions are analyzed independently. Blind recognition is therefore the central result; the mass-equivalent conversion is a secondary, post-selection interpretation of optical phase rates. The absolute {micro}M/min scale remains conditional on an endpoint aggregate fraction measured elsewhere.

02 /Specification & Classification

Click any tag to browse matching papers

Reproducibility ledger

Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.

Sign in to file a reproducibility report.

Similarity Map
SelectedSame fieldCross-field
THISKim '25Ramani '26Nithin '26Chouquet '21Lee '19Ren '26
51% semantic matchSystems Biology
A Hyun Kim, Benjamin Krummenacher, Jason Yeung+2 more·Cell Reports·Dec 1, 2025· 2 citations