Sign in
GenomicsRNA Biology
Peer-reviewed journal article

Natural variation of the cardiac transcriptome in humans

Tatiana DomitroviciD, Mariana H. MoreiraiD, Rodolfo Lopes CarneiroiD, Marcelo Ribeiro AlvesiD, Fernando Lucas PalhanoiD

Abstract

We investigated the gene-expression variation among humans by analyzing previously published mRNA-seq and ribosome footprint profiling (RP) of heart left-ventricles from healthy donors. We ranked the genes according to their coefficient of variation values and found that the top 5% most variable genes had special features compared to the rest of the genome, such as lower mRNA levels and shorter half-lives coupled to increased translation efficiency. We observed that these genes are mostly involved with immune response and have a pleiotropic effect on disease phenotypes, indicating that asymptomatic conditions contribute to the gene expression diversity of healthy individuals.

PDFDOI

02 /Specification & Classification

Click any tag to browse matching papers
Citations
5
FWCI
0.08
Field percentile
37th percentile

Reproducibility ledger

Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.

Sign in to file a reproducibility report.

Similarity Map
SelectedSame fieldCross-field
THISWolf '23Gandhi '21Witte '21Tucker '20Cenik '15Ahmed '23
58% semantic matchGenomics
Scott Wolf, Diogo Melo, Kristina M. Garske+3 more·PLoS Genetics·Jul 6, 2023· 51 citations