High-throughput automatic training system for odor-based learned behaviors in head-fixed mice
Zhe HaniD, Xiaoxing ZhangiD, Jia ZhuiD, Yulei CheniD, Chengyu LiiD
Abstract
Understanding neuronal mechanisms of cognitive behaviors requires efficient behavioral assays. We designed a high-throughput automatic training system (HATS) for olfactory behaviors in head-fixed mice. The hardware and software were constructed to enable automatic training with minimal human intervention. The integrated system was composed of customized 3D-printing supporting components, an odor-delivery unit with fast response, Arduino based hardware-controlling and data-acquisition unit. Furthermore, the customized software was designed to enable automatic training in all training phases, including lick-teaching, shaping, and learning. Using HATS, we trained mice to perform delayed non-match to sample (DNMS), delayed paired association (DPA), Go/No-go (GNG), and GNG reversal tasks. These tasks probed cognitive functions including sensory discrimination, working memory, decision making, and cognitive flexibility. Mice reached stable levels of performance within several days in the tasks. HATS enabled an experimenter to train eight mice simultaneously, therefore greatly enhanced the experimental efficiency. Combined with causal perturbation and activity recording techniques, HATS can greatly facilitate our understanding of the neural-circuitry mechanisms underlying cognitive behaviors.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 38
- FWCI
- 2.26
- Field percentile
- top 13%
- Organism
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- A Low-Cost, Modular Hardware and Software Platform for Head-Fixed Mouse Decision-Making Tasks
Maxwell B. Madden, Mahee Khatri, … Rafiq Huda·bioRxiv·Aug 17, 2026
- Novel and optimized mouse behavior enabled by fully autonomous HABITS: Home-cage Assisted Behavioral Innovation and Testing System
Bowen Yu, Penghai Li, … Yaoyao Hao·eLifePeer-reviewed·Sep 16, 2025
- An automated homecage system for multiwhisker detection and discrimination learning in mice
Sarah M. Bernhard, Jiseok Lee, … Alison L. Barth·PLoS ONEPeer-reviewed·Dec 2, 2020
- AutonoMouse: High throughput automated operant conditioning shows progressive behavioural impairment with graded olfactory bulb lesions.
Andrew Erskine, Thorsten Bus, … Andreas T. Schaefer·PLoS ONEPeer-reviewed·Mar 6, 2019
- Rapid learning of the 5-choice serial reaction time task in an automated rodent training system
Eszter Birtalan, Anita Bánhidi, … Balázs Hangya·bioRxiv·Feb 16, 2020
- Mouse Academy: high-throughput automated training and trial-by-trial behavioral analysis during learning
M. Qiao, T. Zhang, … M. Meister·bioRxiv·Feb 13, 2019