bioRxivBiophysics
Structural basis for relief of the sarcoplasmic reticulum Ca2+-ATPase inhibition by phospholamban at saturating Ca2+ conditions
Abstract
We have performed extensive atomistic molecular dynamics simulations to probe the structural mechanism for relief of sarcoplasmic reticulum Ca2+-ATPase (SERCA) inhibition by phospholamban (PLB) at saturating Ca2+ conditions. Reversal of SERCA-PLB inhibition by saturating Ca2+ operates as a physiological rheostat to reactivate SERCA function in the absence of PLB phosphorylation. Simulation of the inhibitory complex at super-physiological Ca2+ concentrations ([Ca2+]=10 mM) revealed that calcium ions interact primarily with SERCA and the lipid headgroups, but not with the cytosolic domain of PLB or the cytosolic side of the SERCA-PLB interface. At this [Ca2+], a single Ca2+ ion is translocated from the cytosol to the transmembrane transport sites. We used this Ca2+-bound complex as an initial structure to simulate the effects of saturating Ca2+ at physiological conditions ([Ca2+]total{approx}400 M). At these conditions, ~30% of the Ca2+-bound complexes exhibit structural features that correspond to an inhibited state. However, in ~70% of the Ca2+-bound complexes, Ca2+ moves to transport site I, recruits Glu771 and Asp800, and disrupts key inhibitory contacts involving conserved PLB residue Asn34. Structural analysis showed that Ca2+ induces only local changes in interresidue inhibitory interactions, but does not induce dissociation, repositioning or changes in the structural dynamics of PLB. Upon relief of SERCA inhibition, Ca2+ binding produces a productive site I configuration that is sufficient for subsequent SERCA activation. We propose that at saturating [Ca2+] and in the absence of PLB phosphorylation, binding of a single Ca2+ ion in the transport sites rapidly shifts the equilibrium toward a non-inhibited SERCA-PLB complex.
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Dynamics-driven allostery underlies pre-activation of the regulatory Ca2+-ATPase/phospholamban complex
O. N. Raguimova, R. Aguayo-Ortiz, … L. M. Espinoza-Fonseca·bioRxiv·Apr 26, 2020
- Structural Basis for Allosteric Control of the SERCA-Phospholamban Membrane Complex by Ca2+ and cAMP-dependent Phosphorylation
D. K. Weber, M. S. Hernandez, … G. Veglia·bioRxiv·Aug 28, 2020
- Phospholamban Inhibits the Cardiac Calcium Pump Through Reversing the Allosteric Enhancement of Calcium Affinity by ATP
S. R. Cleary, J. Seflova, … S. L. Robia·bioRxiv·Jul 20, 2023
- Protein Docking and Steered Molecular Dynamics Reveal Alternative Regulatory Sites on the SERCA Calcium Transporter
R. F. Alford, N. Smolin, … S. L. Robia·bioRxiv·Dec 19, 2019
- Interaction of a sarcolipin pentamer and monomer with the sarcoplasmic reticulum calcium pump, SERCA
J. P. Glaves, J. Primeau, … H. S. Young·bioRxiv·Jul 8, 2019
- The phospholamban pentamer interacts with the sarcoplasmic reticulum calcium pump SERCA.
H. S. Young, J. P. Glaves, … L. M. Espinoza-Fonseca·bioRxiv·Jul 16, 2018