Journal of Alzheimer s DiseaseGenetic & Genomic MedicinePeer-reviewed journal article
Testing a polygenic risk score for morphological microglial activation in Alzheimer's disease and aging
Earvin S. TioiD, Timothy J. HohmaniD, Milos S. MiliciD, David A. Bennett, Daniel FelskyiD, the Alzheimer’s Disease Neuroimaging Initiative
Abstract
Neuroinflammation and the activation of microglial cells are among the earliest events in Alzheimers disease (AD). However, direct observation of microglia in living people is not currently possible. Here, we indexed the heritable propensity for neuroinflammation with polygenic risk scores (PRS), using results from a recent genome-wide analysis of a validated post-mortem measure of morphological microglial activation. We sought to determine whether a PRS for microglial activation (PRSmic) could augment the predictive performance of existing AD PRSs for late-life cognitive impairment. First, PRSmic were calculated and optimized in a calibration cohort (Alzheimers Disease Neuroimaging Initiative (ADNI), n=450), with resampling. Second, predictive performance of optimal PRSmic was assessed in two independent, population-based cohorts (total n=212,237). Our PRSmic showed no significant improvement in predictive power for either AD diagnosis or cognitive performance. Finally, we explored associations of PRSmic with a comprehensive set of imaging and fluid AD biomarkers in ADNI. This revealed some nominal associations, but with inconsistent effect directions. While genetic scores capable of indexing risk for neuroinflammatory processes in aging are highly desirable, more well-powered genome-wide studies of microglial activation are required. Further, biobank-scale studies would benefit from phenotyping of proximal neuroinflammatory processes to improve the PRS development phase.
- organism: human
- assay: GWAS summary statistics
- research focus: polygenic risk
- approach: statistical model
- Citations
- 2
- FWCI
- 0.41
- Field percentile
- top 39%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- A/T/N polygenic risk score for cognitive decline in old age
Annah M. Moore, Teresa Jenica Filshtein, … Timothy J. Hohman·bioRxiv·Nov 12, 2019
- Population-specific polygenic risk for Alzheimer's disease is associated with Mini-Mental State Examination-based cognitive decline in a Japanese cohort
Yutaro Yanagida, Yutaka Nakachi, … Kazuya Iwamoto·medRxiv·Mar 28, 2026
- Polygenic effects on the risk of Alzheimer's disease in the Japanese population
Masataka Kikuchi, Akinori Miyashita, … Gary R. Conrad·Alzheimer s Research & TherapyPeer-reviewed·Feb 27, 2024
- Neuropathological correlates and genetic architecture of microglial activation in elderly human brain
Daniel Felsky, Tina Roostaei, … Philip L. De Jager·Nature CommunicationsPeer-reviewed·Jan 24, 2019
- Utility of Polygenic Risk Scores in Families with Exceptional Longevity
Laura Xicota, Rong Cheng, … Joseph Hyungwoo Lee·medRxiv·Jul 21, 2025
- Cell-type-specific Alzheimer's disease polygenic risk scores are associated with distinct disease processes in Alzheimer's disease
Hyun‐Sik Yang, Ling Teng, … Reisa Anne Sperling·Nature CommunicationsPeer-reviewed·Nov 30, 2023