Uncovering organizing principles of protein-protein interaction networks
Abstract
This study explores the intricate world of protein-protein interaction (PPI) networks and the critical role of hub proteins within them. PPIs, mediated by various biomolecular forces, orchestrate diverse cellular processes through transient or stable interactions. The study delves into the unique ability of hubs to connect with numerous partners within the network. This research investigates the network properties and focuses on hub-centric questions. This study explores information-carrying capacity, power laws in protein circuits, connectivity profiles of hub proteins, and network expansion or shrinkage during evolution. The study validates the power law for connectivity, identifies a marginal network compression in evolution, unveils hub connectivity patterns, and encourages the exploration of the correlation between protein structure, connectivity, and function. These findings offer valuable insights into network design principles and the critical role of hub proteins in cellular function and evolution.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 0
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Comparative analysis of Pure Hubs and Pure Bottlenecks in Human Protein-protein Interaction Networks
Chandramohan Nithya, Manjari Kiran, Hampapathalu Adimurthy Nagarajaram·bioRxiv·Apr 6, 2021
- Protein Stability, Turnover Kinetics, and Abundance Constrain the Scaling of Protein Interaction Networks
Muskan Goel, Daniel Allen Nissley, … Jonathan P. Schlebach·bioRxiv·May 14, 2026
- Emergence of power-law distributions in protein-protein interaction networks through study bias
David B. Blumenthal, Marta Lucchetta, … Martin H. Schaefer·eLifePeer-reviewed·Dec 11, 2024
- Bacterial protein interaction networks: connectivityis ruled by gene conservation, essentiality andfunction
Maddalena Dilucca, Giulio Cimini, Andrea Giansanti·Current GenomicsPeer-reviewed·Feb 19, 2021
- The latent geometry of the human protein interaction network
Gregorio Alanis‐Lobato, Pablo Mier, Miguel Angel Andrade-Navarro·BioinformaticsPeer-reviewed·Apr 3, 2018
- The strength of protein-protein interactions controls the information capacity and dynamical response of signaling networks
Ching-Hao Wang, Pankaj Mehta, Caleb J. Bashor·bioRxiv·Nov 23, 2018