Scientific ReportsCell BiologyPeer-reviewed journal article
Multiwell-based G0-PCC assay for radiation biodosimetry
Ekaterina RoybaiD, Igor ShuryakiD, Brian Ponnaiya, Mikhail Repin, Sergey PampouiD, Charles KaraniD, Helen C. TurneriD, Guy Y. GartyiD, David J. BrenneriD
Abstract
In cytogenetic biodosimetry, assessing radiation exposure typically requires over 48 hours for cells to reach mitosis, significantly delaying the administration of crucial radiation countermeasures needed within the first 24 hours post-exposure. To improve medical response times, we incorporated the G0-Premature Chromosome Condensation (G0-PCC) technique with the Rapid Automated Biodosimetry Tool-II (RABiT-II), creating a faster alternative for large-scale radiation emergencies. Our findings revealed that using a lower concentration of Calyculin A (Cal A) than recommended effectively increased the yield of highly-condensed G0-PCC cells (hPCC). However, integrating recombinant CDK1/Cyclin B kinase, vital for chromosome condensation, proved challenging due to the properties of these proteins affecting interactions with cellular membranes. Interestingly, Cal A alone was capable of inducing chromosome compaction in some G0 cells even in the absence of mitotic kinases, although these chromosomes displayed atypical morphologies. This suggests that Cal A mechanism for compacting G0 chromatin may differ from condensation driven by mitotic kinases. Additionally, we observed a correlation between radiation dose and extent of hPCC chromosome fragmentation, which allowed us to automate radiation damage quantification using a Convolutional Neural Network (CNN). Our method can address the need for a same-day cytogenetic biodosimetry test in radiation emergency situations.
- Citations
- 3
- FWCI
- 0.62
- Field percentile
- top 38%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Decoding Chromosome Radiosensitivity in G0-Phase PBMCs: Genomic Determinants, Age, Sex effects, and Implications in Radiation Dose Assessment
Usha Yadav, Utkarsha Sagar Mungse, … Balvinder Kaur Sapra·bioRxiv·Jun 3, 2026
- Cytogenetically-based biodosimetry after high doses of radiation
M. Pujol Canadell, J. R. Perrier, … D. Brenner·bioRxiv·May 22, 2019
- Estimating partial body ionizing radiation exposure by automated cytogenetic biodosimetry
Ben C. Shirley, Joan H.M. Knoll, … Peter K. Rogan·International Journal of Radiation BiologyPeer-reviewed·Sep 10, 2020
- Accurate Cytogenetic Biodosimetry Through Automation Of Dicentric Chromosome Curation And Metaphase Cell Selection
Jin Liu, Yanxin Li, … Peter K. Rogan·F1000ResearchPeer-reviewed·Aug 9, 2017
- Automated Cytogenetic Biodosimetry at Population-Scale
Peter K. Rogan, R Lu, … Joan H.M. Knoll·RadiationPeer-reviewed·Mar 29, 2021
- Parallel comparison of pre-conditioning and post-conditioning effects in human cancers and keratinocytes upon acute gamma irradiation
J. Cohen, N. T. Vo, … C. Mothersill·bioRxiv·Oct 22, 2018