Moran Process Version of the Tug-of-War Model: Complex Behavior Revealed by Mathematical Analysis and Simulation Studies
Abstract
AO_SCPLOWBSTRACTC_SCPLOWIn a series of publications McFarland and co-authors introduced the tug-of-war model of evolution of cancer cell populations. The model is explaining the joint effect of rare advantageous and frequent slightly deleterious mutations, which may be identifiable with driver and passenger mutations in cancer. In this paper, we put the Tug-of-War model in the framework of a denumerable-type Moran process and use mathematics and simulations to understand its behavior. The model is associated with a time-continuous Markov Chain (MC), with a generator that can be split into a sum of the drift and selection process part and of the mutation process part. Operator semigroup theory is then employed to prove that the MC does not explode, as well as to characterize a strong-drift limit version of the MC which displays "instant fixation" effect, which was an assumption in the original McFarlands model. Mathematical results are fully confirmed by simulations of the complete and limit versions. They also visualize complex stochastic transients and genealogies of clones arising in the model.
02 /Specification & Classification
Click any tag to browse matching papers- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Comparison of Tug-of-War Models Assuming Moran versus Branching Process Population Dynamics
K. N. Dinh, M. K. Kurpas, M. Kimmel·bioRxiv·Oct 20, 2023
- A tug-of-war between driver and passenger mutations in cancer and other adaptive processes
Christopher Dennis McFarland, Leonid A Mirny, Kirill S Korolev·bioRxiv·Feb 26, 2014
- A unified simulation model for understanding the diversity of cancer evolution
A. Niida, T. Hasegawa, … S. Miyano·bioRxiv·Jan 28, 2020
- Genotype patterns in growing solid tumors
Mridu Nanda, Rick Durrett, … U Duke·bioRxiv·Aug 12, 2018
- Genealogies in Growing Solid Tumors
Duke U. Rick Durrett·bioRxiv·Jan 7, 2018
- An exactly solvable, spatial model of mutation accumulation in cancer
C. Paterson, M. A. Nowak, B. Waclaw·bioRxiv·Oct 27, 2016