Cell Reports MethodsNeurosciencePeer-reviewed journal article
Uncovering biomarkers during therapeutic neuromodulation with PARRM: Period-based Artifact Reconstruction and Removal Method
Evan M. Dastin-van RijniD, Nicole R. ProvenzaiD, Jonathan S. CalvertiD, Ro’ee GilroniD, Anusha B. AllawalaiD, Radu DarieiD, Sohail H. SyediD, Evan Matteson, Gregory S. VogtiD, Michelle Avendaño-Ortega, Ana C. Vásquez, Nithya RamakrishnaniD, Denise N. OswaltiD, Kelly Rowe BijankiiD, Robert Wilt, Philip A. StarriD, Sameer Anil ShethiD, Wayne K. GoodmaniD, Matthew T. HarrisoniD, David A. BortoniD
Abstract
Advances in device development have enabled concurrent stimulation and recording at adjacent locations in the central nervous system. However, stimulation artifacts obscure the sensed underlying neural activity. Here, we developed a novel method, termed Period-based Artifact Reconstruction and Removal Method (PARRM), to remove stimulation artifacts from neural recordings by leveraging the exact period of stimulation to construct and subtract a high-fidelity template of the artifact. Benchtop saline experiments, computational simulations, five unique in vivo paradigms across animal and human studies, and an obscured movement biomarker were used for validation. Performance was found to exceed that of state-of-the-art filters in recovering complex signals without introducing contamination. PARRM has several advantages: it is 1) superior in signal recovery; 2) easily adaptable to several neurostimulation paradigms; and 3) low-complexity for future on-device implementation. Real-time artifact removal via PARRM will enable unbiased exploration and detection of neural biomarkers to enhance efficacy of closed-loop therapies. SummaryOnline, real-time artifact removal via PARRM will enable unbiased exploration of neural biomarkers previously obscured by stimulation artifact.
- organism: human
- organism: mouse
- assay: electronic health records
- research focus: drug response / drug discovery
- research focus: benchmarking
- approach: experimental assay
- Citations
- 23
- FWCI
- 1.15
- Field percentile
- top 25%
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