Biomedical Optics ExpressBiophysicsPeer-reviewed journal article
Transforming Hyperspectral Data into Insight: The DREAM Approach for Pathology
Mason Hong, Daniel E. S. Koo, Jason A. JungeiD, Scott E. FraseriD, Francesco CutraleiD
Abstract
Quantitative pathology remains limited due to the need for chemical staining and subjective interpretation of tissue features. Autofluorescence imaging offers a label-free alternative: however, high-dimensional excitation-emission datasets pose challenges for visualization and reproducible analysis. Here, we present Dimensionality Reduction for Enhanced Autofluorescence Microscopy (DREAM), a method that condenses multi-excitation emission spectra into a compact, information-rich format using phasor-based tools. Applied to unstained esophageal tissue samples, DREAM enables high-contrast visualizations that distinguish key histological structures without the need for exogenous labeling. Quantitative assessments across multiple datasets show DREAM improves colorfulness, sharpness, and consistency over single-laser acquisitions, supporting its potential to advance objective, label-free diagnostics through enhanced spectral visualization.
- assay: imaging
- assay: fluorescence / live-cell microscopy
- research focus: dimensionality reduction
- research focus: spatial domain detection
- research focus: cell type annotation
- approach: deep learning
- approach: statistical model
- Citations
- 1
- FWCI
- 0.58
- Field percentile
- top 33%
- Optical Imaging and Spectroscopy Techniques
- Spectroscopy Techniques in Biomedical and Chemical Research
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