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Integrated Continuous Biomanufacturing of Recombinant Adeno-Associated Virus

Ralf PlieningeriD, Julia M MuelleriD, Daniela TobleriD, Efe SaygiliiD, Patrick WerderiD, Yuki HiguchiiD, Ryosuke TakahashiiD, Sebastian VoggiD, Thomas Müller‐SpäthiD, Sven GoebeliD, Thomas K. VilligeriD

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Abstract

Recombinant adeno-associated virus (rAAV) manufacturing remains constrained by low yields, costly purification, and process complexity, limiting cost-effective access to gene therapy. Here, we demonstrate an integrated continuous biomanufacturing platform that transfers proven antibody-manufacturing technology to rAAV production by coupling perfusion to semi-continuous twin-column affinity capture (CaptureSMB). This architecture enables continuous harvest of extracellular rAAV without cell lysis, depth filtration, or endonuclease treatment, sustaining stable operation over five days. Relative to conventional batch processing, perfusion improved capsid or vector genome yield depending on the production process, while affinity capture alone reduced total DNA to batch-comparable levels, with no measurable loss in impurity clearance or potency. By consolidating multiple manual unit operations into one continuous workflow, the platform may reduce manual intervention and process footprint. Its modular design may generalize to other rAAV serotypes, inducible producer cell lines, and viral vector classes, offering a potential route toward more efficient gene therapy manufacturing.

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