Alzheimer s & DementiaGenomicsPeer-reviewed journal article
Increased APOEϵ4 expression is associated with reactive A1 astrocytes and the difference in Alzheimer Disease risk from diverse ancestral backgrounds
Katrina Celis, Anthony J. GriswoldiD, Parker L. BussiesiD, Farid RajabliiD, Patrice L. Whitehead, Kara L. Hamilton‐NelsoniD, Gary W. BeechamiD, Derek Michael DykxhoorniD, Karen NuytemansiD, Liyong WangiD, Olivia K. GardneriD, Daniel A. Dorfsman, Eileen H. BigioiD, Marsel M. MesulamiD, Sandra WeıntraubiD, Changiz GeulaiD, Marla GearingiD, Clifton L. DalgardiD, Elisa McGrath Martinez, William K. ScottiD, Jonathan L. HainesiD, Margaret Ann Pericak‐VanceiD, Juan I. YoungiD, Jeffery M. VanceiD
Abstract
APOE{varepsilon}4 African local genomic ancestry (LA) confers less risk for Alzheimer disease (AD) relative to European LA (LA) carriers. Single nucleus RNA sequencing from AD-APOE{varepsilon}4/4 frontal cortex found European LA carriers have a 1.45-fold greater APOE{varepsilon}4 expression (p< 1.8 E10-313) and are associated with a unique A1 reactive astrocyte cluster. This suggests a potential mechanism for the increased risk for AD seen in European LA carriers of APOE{varepsilon}4.
- organism: human
- assay: scRNA-seq
- research focus: differential expression
- research focus: cell type annotation
- approach: statistical model
- Citations
- 2
- FWCI
- 0.15
- Field percentile
- top 48%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Ancestry-related differences in chromatin accessibility and gene expression of APOE4 are associated with Alzheimer disease risk
Katrina Celis, Maria del Mar Muñiz Moreno, … Jeffery M. Vance·bioRxiv·Oct 27, 2022
- APOE E4 Alzheimer's Risk Converges on an Oligodendrocyte Subtype in the Human Entorhinal Cortex
Louise A. Huuki-Myers, Heena R. Divecha, … Leonardo Collado‐Torres·bioRxiv·Nov 20, 2025
- Global and local ancestry modulate APOE association with Alzheimer's neuropathology and cognitive outcomes in an admixed sample
Michel Satya Naslavsky, Cláudia Kimie Suemoto, … Lea T. Grinberg·Molecular PsychiatryPeer-reviewed·Sep 7, 2022
- Converging evidence for differential regulatory control of APOEε4 on African versus European haplotypes
Karen Nuytemans, Marina Lipkin Vasquez, … Jeffery M. Vance·bioRxiv·Aug 23, 2021
- APOE missense variant R145C is associated with increased Alzheimer's disease risk in African ancestry individuals with the APOE ϵ3/ϵ4 genotype
Yann Le Guen, Michaël E. Belloy, … Michael D. Greicius·medRxiv·Oct 20, 2021
- Dissecting the role of Amerindian genetic ancestry and ApoE ε4 allele on Alzheimer disease in an admixed Peruvian population
Maria Victoria Marca-Ysabel, Farid Rajabli, … Margaret Ann Pericak‐Vance·Neurobiology of AgingPeer-reviewed·Dec 10, 2020