Scientific ReportsGenomicsPeer-reviewed journal article
Discordant gene responses to radiation in humans and mice: hematopoietically humanized mice may save the day for radiation biomarker identification.
Shanaz A. GhandhiiD, Lubomir B. Smilenov, Igor ShuryakiD, Mònica Pujol-CanadelliD, Sally A. AmundsoniD
Abstract
The mouse (Mus musculus) is an extensively used model of human disease and responses to stresses such as ionizing radiation. As part of our work developing gene expression biomarkers of radiation exposure, dose, and injury, we have found many genes are either up-regulated (e.g. CDKN1A, MDM2, BBC3, and CCNG1) or down-regulated (e.g. TCF4 and MYC) in both species after irradiation. However, we have also found genes that are consistently up-regulated in humans and down-regulated in mice (e.g. DDB2, PCNA, GADD45A, SESN1, RRM2B, KCNN4, IFI30, and PTPRO). Here we test a hematopoietically humanized mouse as a potential in vivo model for biodosimetry studies, measuring the response of these 14 genes one day after radiation exposure, and comparing it with that of human blood irradiated ex vivo, and blood from whole body irradiated mice. We found that human blood cells in the hematopoietically humanized mouse in vivo environment recapitulated the gene expression pattern expected from human cells, not the pattern seen from in vivo irradiated normal mice. The results of this study support the use of hematopoietically humanized mice as an in vivo model for radiation gene expression studies relevant to humans.
- organism: human
- organism: mouse
- assay: bulk RNA-seq
- research focus: differential expression
- research focus: benchmarking
- approach: statistical model
- Citations
- 41
- FWCI
- 2.81
- Field percentile
- top 10%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Effect of age and sex on gene expression-based radiation biodosimetry using mouse peripheral blood
Constantinos G. Broustas, Igor Shuryak, … Sally A. Amundson·Cytogenetic and Genome ResearchPeer-reviewed·Jan 1, 2023
- Mouse Genomic Associations with Ex Vivo Sensitivity to Simulated Space Radiation
Egle Cekanaviciute, Duc Tran, … Sylvain V. Costes·bioRxiv·Mar 3, 2022
- Genome-wide transcriptomic response of whole blood to radiation
Ahmed Salah, Daniel Wollschläger, … Sebastian Zahnreich·Scientific ReportsPeer-reviewed·Jun 5, 2025
- Comparative Transcriptional Responses of Human Blood to Neutron and Photon Irradiation
Ahmed Salah, Daniel Wollschläger, … Sebastian Zahnreich·bioRxiv·Sep 1, 2026
- Elucidation of dose-dependent transcriptional events immediately following ionizing radiation exposure
Eric Christian Rouchka, Robert M Flight, … Robert S. Keynton·bioRxiv·Oct 23, 2017
- Radiation dermatitis in the hairless mouse model mimics human radiation dermatitis
Jessica Lawrence, Davis M. Seelig, … Luke H. Hoeppner·Scientific ReportsPeer-reviewed·Oct 22, 2024