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BiophysicsbioRxiv

Enhanced diffusion by reversible binding to active polymers

S. Lalitha Sridhar, J. Dunagin, K. Koo, L. Hough, F. J. Vernerey

Abstract

Cells are known to use reversible binding to active biopolymer networks to allow diffusive transport of particles in an otherwise impenetrable mesh. We here determine the motion of a particle that experiences random forces during binding and unbinding events while being constrained by attached polymers. Using Monte-Carlo simulations and a statistical mechanics model, we find that enhanced diffusion is possible with active polymers. However, this is possible only under optimum conditions that has to do with the relative length of the chains to that of the plate. For example, in systems where the plate is shorter than the chains, diffusion is maximum when many chains have the potential to bind but few remain bound at any one time. Interestingly, if the chains are shorter than the plate, we find that diffusion is maximized when more active chains remain transiently bound. The model provides insight into these findings by elucidating the mechanisms for binding-mediated diffusion in biology and design rules for macromolecular transport in transient synthetic polymers. O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=92 SRC="FIGDIR/small/428690v1_ufig1.gif" ALT="Figure 1"> View larger version (20K): org.highwire.dtl.DTLVardef@1f09992org.highwire.dtl.DTLVardef@f26b4borg.highwire.dtl.DTLVardef@162368corg.highwire.dtl.DTLVardef@eb2b45_HPS_FORMAT_FIGEXP M_FIG C_FIG

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