Genetic diversity and population structure

The paper analyzes replicate flower color hybrid zones in Antirrhinum to identify loci associated with gene flow barriers using haplotagging, FST scans, and genealogical methods.

The paper analyzes population genomics of the African Fig Fly in North America, finding limited population structure but signals of recent selection, particularly in pesticide resistance and temperate adaptation.

The paper develops a theoretical framework linking the effective number of breeders to demographic stochasticity in iteroparous species, showing how Nb can amplify environmental variance and increase extinction risk.

The paper develops a method to estimate paternity, sibships, and pollen dispersal in a snapdragon hybrid zone using population data.

NewtCap is a target capture method for Salamandridae genomes, effective across multiple lineages but not other salamander families, enabling phylogenomics and conservation studies.

The paper uses DEST 2.0 to analyze genetic variation in D. melanogaster across continents and time, identifying adaptation patterns and stable spatial genetic structures.

The paper compares parallel ecotypes of Littorina saxatilis in Spain and Sweden to assess divergence in gene flow, finding stronger reproductive isolation in Spain despite similar phenotypic divergence.

This study examines genetic differentiation in Culex tarsalis mosquitoes, showing environmental factors influence their genetic makeup and adaptation to climate change.

The study examines the effects of habitat amount and fragmentation on genetic diversity in the Glanville fritillary butterfly, finding habitat amount positively influences diversity while fragmentation has a negligible impact.

The paper analyzes whole-genome data from wild boars to trace their demographic history and identify genetic signatures of local adaptation in Central Asia.

This study examines parallel adaptation in two invasive Zaprionus species to desert environments, finding genomic parallels but ecological divergence facilitating coexistence.

This study shows that tectonic uplift and oceanic separation shape the distribution and speciation of Kapokapowai dragonflies in New Zealand.

This study examines genetic diversity and structure of wild and farmed Saccharina latissima populations in Europe to assess gene flow risks and traceability.

This study uses population genomic data to trace the evolutionary history of giant mice on the Faroe Islands, revealing hybrid origins, Viking-era colonization, and challenges in identifying genes under selection.

The paper uses genomics and resistance assays to identify resistant individuals in two tree species affected by myrtle rust, highlighting the potential for genetic breeding programs.

This study identifies large structural variants as drivers of parallel adaptation in Trifolium repens during global invasion.

This study identifies genes and adaptations in the blue dasher dragonfly that enable survival in urban environments and predicts its spread with urbanization.

This study identifies signatures of positive selection in urban and rural white clover populations using whole genome sequencing, revealing shared and distinct genomic regions under selection.

RDAforest identifies environmental drivers of polygenic adaptation by using random forest regression to model genetic covariance structures and detect non-linear relationships in simulated and real datasets.

This study assesses genetic diversity and isolation in UK juniper populations using SNP and SSR markers, finding substantial gene flow barriers between population centres.

This study uses mitochondrial DNA and whole-genome sequence data to analyze species boundaries, diversification times, and hybridization in Andean leaf-eared mice, finding that diversification coincided with Pleistocene climate changes and ongoing hybridization between two species.

This review examines connectivity and population structure of marine species in the Skagerrak, finding high but asymmetric connectivity and distinct populations linked to coastal complexity and barriers to gene flow.

This study investigates genetic differentiation in a tapeworm parasite despite ongoing gene flow, identifying genomic and transcriptomic signatures of host-specific adaptation and ecological speciation.

The paper analyzes genetic diversity, population structure, and cannabinoid profiles of feral Cannabis sativa in the US to inform hemp cultivar development.

This study analyzes the genomic signatures and demographic history of the yellow-breasted bunting, revealing genetic erosion and inbreeding depression due to recent population declines.

This study identifies genetic markers associated with plague survival in prairie dogs by comparing genomes of survivors and non-survivors, finding conserved genes linked to human plague survival.

This study examines the genetic adaptation of grain amaranth in India, finding comparable diversity to its native range and identifying genomic loci linked to climate adaptation.

The paper uses genomic diversity data to estimate the variance ratio of reproductive output in males and females across apes and humans, finding evidence for exceptional reproductive output in some males.

This study assesses genetic diversity and population structure of Atlantic bottlenose dolphins in Mississippi Sound using whole mitogenomes from stranded animals, identifying four distinct populations.