Author

A. Berglund

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 1 Immunology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Organism:human· 2 Approach:statistical model· 2 Approach:biophysical modeling· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

A. Anderson· 1 shared A. Chen· 1 shared A. El-Kenawi· 1 shared A. Ibrahim-Hashim· 1 shared B. Ruffell· 1 shared C. D. Lennon· 1 shared C. Gatenbee· 1 shared C. T. Pager· 1 shared

Activity by Year

2018-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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1 shared paperImmunology

A. Anderson

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Zika virus infection in a cell culture model reflects the transcriptomic signatures in patients.

G. Berglund, C. D. Lennon, P. Badu, A. Berglund, C. T. Pager

This study compares transcriptomic changes in ZIKV-infected cell cultures with patient RNA-seq data, finding similarities in transcriptional profiles but limited overlap in alternative splicing.

bioRxiv · May 25, 2024 · PreprintMicrobiology

Mutation of two intronic nucleotide alters RNA structure and dynamics, inhibiting MBNL1 and RBFOX1 regulated splicing of the Insulin Receptor

Z. Nowzari, M. Hale, J. Ellis, S. Biaesch, S. Vangaveti, K. Reddy, A. Chen, A. Berglund

The paper shows that mutating two intronic nucleotides alters RNA structure and dynamics, disrupting MBNL1 and RBFOX1 regulation of INSR exon 11 splicing.

bioRxiv · Jan 8, 2024 · PreprintBiochemistry

Acidity promotes tumor progression by altering macrophage phenotype in prostate cancer

A. El-Kenawi, C. Gatenbee, M. Robertson-Tessi, R. Bravo, J. Dhillon, Y. Balagurunathan, A. Berglund, N. Visvakarma, A. Ibrahim-Hashim, J. Choi, K. Luddy, R. Gatenby, S. P. Thomas, A. Anderson, B. Ruffell, R. Gillies

This study shows that tumor acidity promotes prostate cancer by altering macrophage phenotype, both in vitro and in vivo, and is supported by in silico modeling.

bioRxiv · Nov 26, 2018Immunology