Author

A. Sanchez-Flores

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4 Ecology· 2 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Research Focus:cell type annotation· 3 Approach:experimental assay· 3 Assay:metagenomics· 3 Research Focus:chromatin & epigenetic regulation· 2 Research Focus:gene regulatory network inference· 2 Research Focus:host-pathogen & immune response· 2 Assay:whole-genome sequencing· 2

Frequent Co-Authors

A. Herrera-Estrella· 2 shared A. Sanchez-Reyes· 2 shared B. Gomez-Gil· 2 shared B. Taboada· 2 shared C. Ben Mamoun· 2 shared C. F. Arias· 2 shared E. Cornillot· 2 shared J. E. Munoz-Medina· 2 shared

Activity by Year

2019-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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2 shared papersMicrobiology

A. Herrera-Estrella

Mutual co-authors in cluster

Author profile →

7 papers

Recent·Most cited

Multiomics analysis reveals B. MO1 as a distinct Babesia species and provides insights into its evolution and virulence.

P. Singh, P. Vydyam, T. Fang, M. Kumar, K. Estrada, R. Grande, A. Sanchez-Flores, L. M. Gonzalez, E. Montero, S. Chakravarty, S. Lonardi, V. Berry, V. Ranwez, B. Carcy, D. Depoix, , C. Ben Mamoun

The paper identifies B. MO1 as a distinct Babesia species through multiomics analysis, revealing genomic and functional differences from B. divergens and insights into their evolution and virulence.

Emerging Microbes & Infections · Sep 1, 2024Peer-reviewedMicrobiology

Regional epidemic dynamics and Delta variant diversity resulted in varying rates of spread of Omicron-BA.1 in Mexico

S. Zarate, B. Taboada, M. Rosales-Rivera, R. Garcia-Lopez, J. E. Munoz-Medina, A. Sanchez-Flores, A. Herrera-Estrella, B. Gomez-Gil, N. S. Mojica, A. G. Salas-Lais, J. A. Vazquez-Perez, D. A. Cabrera-Gaytan, L. Fernandes-Matano, L. A. Uribe-Noguez, J. B. Chale-Dzul, , C. F. Arias

This paper analyzes the spread dynamics of the Omicron-BA.1 variant in Mexico, finding that regional differences in Delta variant diversity and inter-wave case numbers influenced BA.1 spread rates.

bioRxiv · Oct 18, 2022 · PreprintMicrobiology

Comparing the evolutionary dynamics of predominant SARS-CoV-2 virus lineages co-circulating in Mexico

H. G. Castelan-Sanchez, L. Delaye, R. P. Inward, S. Dellicour, B. Gutierrez, N. Martinez de la Vina, C. Boukadida, O. Pybus, G. de Anda Jauregui, P. Guzman, M. Flores Garrido, O. Fontanelli, M. H. Rosales, A. Meneses, G. Olmedo-Alvarez, , M. Escalera-Zamudio

The paper analyzes the evolutionary dynamics of five dominant SARS-CoV-2 lineages in Mexico, showing lineage replacement patterns and regional spread.

bioRxiv · Jul 5, 2022Evolutionary Biology

Decoding The Nuclear Genome of The Human Pathogen Babesia duncani Shed Light on its Virulence, Drug Susceptibility and Evolution among Apicomplexa

S. Lonardi, P. Singh, Q. Liang, P. Vydyam, E. Khabirova, T. Fang, S. Gihaz, J. Thekkiniath, M. Munshi, S. Abel, G. Batugedara, M. Gupta, X. M. Lu, T. Lenz, S. Chakravarty, , C. Ben Mamoun

This study decodes the nuclear genome of Babesia duncani, identifies virulence factors and drug targets, and discovers potent inhibitors for treating babesiosis.

bioRxiv · May 9, 2022Microbiology

Hi-C deconvolution of a textile-dye degrader microbiome reveals novel taxonomic landscapes and link phenotypic potential to individual genomes

A. Sanchez-Reyes, L. d. M. Breton-Deval, H. Mangelson, I. Salinas-Peralta, A. Sanchez-Flores

This study deconvolutes a textile-dye degrader microbiome using Hi-C to link phenotypic potential to individual genomes, revealing novel taxa and functional enzymes.

bioRxiv · Jun 18, 2020Microbiology

One step towards bioremediating a heavily polluted river: Metagenomic insights on the function of microbial community

L. d. M. Breton-Deval, A. Sanchez-Reyes, A. Sanchez-Flores, K. Juarez, P. Mussali-Galante

This study analyzes metagenomic data from four sites along the Apatlaco River to identify microbial communities and enzymes involved in bioremediation of pollutants.

bioRxiv · Jun 21, 2019 · PreprintEcology

Water quality assessments and metagenomic analysis of the polluted river Apatlaco, Mexico

L. Breton-Deval, k. Juarez, A. Sanchez-Flores, R. Vera-Estrella

This study assesses water quality and bacterial diversity in the polluted river Apatlaco, Mexico, showing how pollution alters microbial communities and poses health risks.

bioRxiv · Jan 31, 2019Ecology